Graph.h

#pragma once
#include<string>
#include<vector>
#include<array>
#include<iostream>
#include<fstream>
#include "Node.h"
#include "Edge.h"
#include<utility>
#include<algorithm>
#include<set>

using std::vector;
using std::string;
using std::pair;

class Graph {
    private:

        unsigned int k;                         

        vector<Node> nodes;  

        vector<Edge> edges;                     

        void calcNodeList(vector<string>& stringListSequence); 
    public:

        Graph();

        vector<Node>& getNodes();               
                              
        unsigned int getNumberOfSequences();    

        unsigned int getNumberOfNodes(unsigned int sequence); 

        vector<Edge>& getEdges();               

        void readFastaFiles(string nameFile, unsigned int k);
        
        void resetGraph();
};